Experimental Methods for HIV+ Tumor Molecular Characterization Project
On this page researchers can find detailed information describing how CGCI data was generated by genomic platform, including protocols for establishing high-quality nucleic acid samples.
CGCI Sample Naming
CGCI samples are named using a coding system specific to OCG characterization programs. Please use the OCG Sample Codes document to properly discern the metadata reiterated within the sample name. OCG Sample Codes_finalized 09 2020.pdf
Nucleic Acid Sample Processing
CGCI project teams use high-quality RNA and DNA from case-matched tumor and normal tissues to generate comprehensive genomics data. See the Sample Preparation Protocols below for details.
*Cick on the project symbol under each method to open up protocols.*
|General Methodology||Sample Preparation Protocols|
|DNA/RNA Extraction with AllPrep and mirVana Isolation Kits, DNA extraction with QIAmp DNA Blood Mini Kit||CaCx|