CGCI Data Matrix

Last Updated: March 04, 2020

CGCI data matrix is being continuously updated as new data from ongoing projects become available. See "How to Navigate the CGCI Data Matrix" for details on different types of available CGCI data. 

Disease Patient Data Gene Expression Copy Number miRNA Sequence Other
Burkitt's Lymphoma (BLGSP) - Ongoing
Burkitt's Lymphoma (BLGSP)
mRNA-seq
Whole Genome
miRNA-seq
Whole Genome
mRNA-seq
Targeted Resequencing
HIV+ Tumor Molecular Characterization Project (HTMCP) - Ongoing
HIV+ Diffuse Large B-Cell Lymphoma (HTMCP-DLBCL)
Clinical File
Sample Matrix
mRNA-seq
Whole Genome
miRNA-seq
Whole Genome
mRNA-seq
Targeted Resequencing
HIV+ Cervical Cancers (HTMCP-CC)
Clinical File
Sample Matrix
mRNA-seq
Whole Genome
miRNA-seq
Whole Genome
mRNA-seq
Targeted Resequencing
HIV+ Lung Cancers (HTMCP-LC)
Clinical File
Sample Matrix
mRNA-seq
Whole Genome
miRNA-seq
Whole Genome
mRNA-seq
Targeted Resequencing
Medulloblastoma (MB) - Completed
Medulloblastoma (MB)
Clinical File
Sample Matrix
Non-Hodgkin's Lymphoma (NHL) - Completed
Diffuse Large B-Cell Lymphoma (NHL-DLBCL)
Clinical File
Sample Matrix
mRNA-seq
Whole Genome
Whole Genome
mRNA-seq
Whole Exome
Follicular Lymphoma (NHL-FL)
Clinical File
Sample Matrix
mRNA-seq
Whole Genome
Whole Genome
mRNA-seq
Whole Exome

Projects and assays with available information or data are hyperlinked

Patient Data:
Clinical File
Sample Matrix
Gene Expression:
mRNA-seq
Copy Number:
Whole Genome
miRNA:
miRNA-seq
Sequence:
Whole Genome
mRNA-seq
Targeted Resequencing
Other:
Patient Data:
Clinical File
Sample Matrix
Gene Expression:
mRNA-seq
Copy Number:
Whole Genome
miRNA:
miRNA-seq
Sequence:
Whole Genome
mRNA-seq
Targeted Resequencing
Other:
Patient Data:
Clinical File
Sample Matrix
Gene Expression:
mRNA-seq
Copy Number:
Whole Genome
miRNA:
miRNA-seq
Sequence:
Whole Genome
mRNA-seq
Targeted Resequencing
Other:
Patient Data:
Clinical File
Sample Matrix
Gene Expression:
miRNA:
Other:
Patient Data:
Clinical File
Sample Matrix
Gene Expression:
Copy Number:
Whole Genome
miRNA:
Other:
Patient Data:
Clinical File
Sample Matrix
Gene Expression:
Copy Number:
Whole Genome
miRNA:
Other: