HTMCP-Cervical Cancer Human Papillomavirus (HPV) Transcript References

Friday, August 21, 2020

Supplemental data from the manuscript "Analysis of Ugandan Cervical Carcinomas Identifies Human Papillomavirus (HPV) Clade-specific Epigenome and Transcriptome Landscapes. PMID: 32747824" : 

To probe the impact of viral gene expression on tumor gene expression, HTMCP project team performed unsupervised clustering of viral E1,E2, E6, and E7 transcripts which had annotations associated with them in GenBank (download date: December 2019). A list of these references can be accessed via the “CGCI HTMCP-CC HPV Transcript References (December 2019)

CGCI
Last updated: August 21, 2020